Protein Software
Software 1-20 of 40 | Pages: Go to 1 2 Next >> page
All | Freeware
3D Protein Alignment v1.1
User Rating:
4 Stars
3D Protein Alignment v1.1

3D Protein Alignment is an easy-to-use, command-line utility which allows you to compare protein alignment of 3D structures in PDB (Brookhaven) format for computer modelling purposes and protein structure classification. The program lets you determine the set of matched amino acids and the degree of 3D similarity between two proteins. The output consists of the 3D coordinates of the second protein, which are rotated and shifted to best fit the coordinates of the first protein. You can display and manipulate the stereo-image of the final results using the built-in mirror stereo-glasses function. In addition, the output includes a linear representation of the 3D alignment, and a list of the structurally conservative regions that correspond to the given RMS deviations.(for Windows)


Download Now (248.0 KB)
  • Downloads:75
  • Date updated:2009-01-28
  • Version:v1.1
Software - Protein
Advanced Pathway Painter 2.04 -  This freeware program visualizes pathways (KEGG, BioCarta, GenMAPP, ...). The user has the possibility to display any kind of quantitative data from gene and protein experiments directly within the pathways (colours represent the value). The linking between the pathway items and the experiment data is done over the gene or protein names and... (for Windows) (31/0) download
Bio2MIDI 2.1 -  Bio2Midi converts the text of a DNA or protein sequence to a MIDI file, which you may immediately audition, or import into any MIDI sequencer for further compositional processing. Choose to listen to the sequences as 4-note DNA bases, or as 20-note protein amino acids, or both at once. You can select specific data sections to be translated,... (for Windows) (20/0) download
Food Watcher Plus v5.1 -  Food Watcher Plus is a nutrient counter that tracks calories, total fat, cholesterol, carbohydrates, fiber, and protein. Food Watcher Plus can be used as a planning tool, rather than just a logbook. You can determine the caloric requirement to maintain your current weight based on your age and activity level. It also calculates your recommended... (for Windows) (15/0) download
biOpen 1.5.1 -  biOpenĀ« is a new and unique nucleic acid and protein sequence analysis and structure visualization software based on dynamic integration of analysis tools. Extensive modularity gives the user the freedom to pick the analysis tools that meet his needs and budget. All selected tools work in a fully integrated environment with powerful display and... (for Mac) (10/0) download
BioSeqAnalyzer 1.0 -  BioSeqAnalyzer is a bioinformatics software tool for analyzing DNA and protein sequences. Its Windows interface makes sequence analysis extremely easy. BioSeqAnalyzer, registered version, supports the following operations: Alignment Scoring. Linear global alignment. Affine global alignment. Local alignment.... (for Windows) (13/0) download
Food Composition v1.0 -  Food Composition is a nutritional database that includes information for almost 6,000 items. You can view 31 different nutrients along with the percentages of carbohydrate, protein, and fat (which is also displayed on a pie chart). You can select the serving size, and select the number of servings.The data for this program was taken from the... (for Windows) (23/0) download
Nutribase Personal+ Nutrition Manager v1.05 -  Nutribase Personal+ Nutrition Manager is a comprehensive nutritional database and analysis program. You can track personal information for up to 10 individual users. Simply enter your name, sex, height, current and desired weight, age, body frame, daily activity level, daily exercise goals, and more. Nutribase calculates your daily calorie... (for Windows) (14/0) download
BioMolecula 3D ScreenSaver 1.1 -  This screensaver shows real 3D models of biological molecules in dynamics. Your screen will look like screens of computers in science fiction films! Six molecules are available in the current version: four prototypes of DNA and two proteins. This screensaver shows real 3D models of biological molecules in dynamics. Your screen will look like... (for Windows) (34/0) download
BioMolecula WallPaper 1.0 -  This program creates custom Desktop Wallpaper for your PC every time Windows starting. Real 3D models of biological molecules are shown on wallpaper image. Six molecules are available in the current version: four prototypes of DNA and two proteins. This program creates custom Desktop Wallpapers for your PC every time Windows starting. Real 3D... (for Windows) (3/0) download
FuzzyFluid 1.11 -  Fuzzy logic replaces inflexible bivalent logic and complicated mathematical functions with simple linguistic rules. The models based on these rules can be constructed using relatively little mathematics, and exhaustive computer calculation can be replaced with easily manageable computer programs. Fuzzy logic can actually be used to create models... (for Windows) (28/0) download
Simplebean Health Guide 1.0 -  The free Simplebean Health Guide quickly calculates your health statistics and targets. To plan a healthy diet, you get important health information such as your Body Mass Index (BMI), Basal Energy Expenditure (BEE), personalized daily calorie requirements and targets, and the target weight for your frame size. The health guide even breaks down... (for Windows) (8/0) download
NutriGenie Diabetes Meal Planner v4.4 -  NutriGenie Diabetes Meal Planner is a comprehensive nutrition program that analyzes 8 nutrients in your diet and helps you devise an optimal diet to manage diabetes. Calculate your ideal weight, suggested daily caloric and nutrient intakes, body mass index, and target heart rate, based on personal factors. Enter your daily food consumption for... (for ) (13/1) download
Food Smart Home Edition v2.0 -  Food Smart Home Edition is a nutritional analysis and nutritional education program that will help you maintain your family's health through good nutrition. Food Smart allows you to analyze individual foods, recipes and menus as well as your diet. It helps you to calculate your ideal weight and body mass index, as well as your daily energy... (for ) (18/0) download
OnTrack Nutrition 1.2.2 -  OnTrack Nutrition takes the guess-work out of dieting. OnTrack Nutrition takes the guess-work out of dieting. Graphical charts make it easy to track and evaluate your intake of calories, protein, carbohydrates, fat, cholesterol, sodium and over 20 other vitamins and minerals. OnTrack Nutrition includes a database of over 6,000 foods and a simple... (for Windows) (14/0) download
DietKwik Diet and Nutrit 1.0.1 -  Track your nutritional intake. Keep track of the foods you eat and the nutrients they contain. Quickly and easily record your meals and snacks. Summarize your intake of fats, carbohydrates, protein calories and see a running percentage of calories from fat.Access the internet directly from DietKwik for online nutritional data on thousands of... (for Windows) (5/0) download
Diet Spread 4.0 -  Diet Spread is a lightweight spreadsheet/database. The database accepts nutritional values from your food labels. The spreadsheet displays, summarizes, and prints the nutrient values using convenient household measures. (for Windows) (7/0) download
BikePro for Windows v3.0g -  BikePro for Windows is a performance optimizer for the serious cyclist that tracks and analyzes daily cycling activities and the foods consumed. The daily training log tracks elapsed time, distance, cadence, top speed, training level, temperature, wind, terrain, resting heart, and more. The diet log tracks the foods you eat each day plus the... (for ) (6/0) download
Diet Sleuth 4.3.1 -  Track the foods you eat on a daily basis. Diet Sleuth (previously Diet Something) is a nutritional database and personal health logbook for the Macintosh. Diet Sleuth allows you to keep track of what foods you eat each day, and their nutritional value. For each day, you select the foods you have eaten, and the number of servings of each. Diet... (for ) (3/0) download
MasterCook: Cooking Light v4.02 -  MasterCook: Cooking Light is a collection of nutritious and healthy recipes. Each recipe includes a nutritional analysis. You can search the recipes and bookmark your favorites. You can also sort the recipes by recipe name, category, calories, percent fat, sodium, calcium, fiber, carbohydrates, and protein.It also includes a Glossary with... (for ) (53/0) download